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r gnavus atcc 35913 strain  (ATCC)


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    ATCC r gnavus atcc 35913 strain
    R Gnavus Atcc 35913 Strain, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 120 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/r+gnavus+atcc+35913+strain/Ruminococcus+gnavus+Moore+et+al/10__1016_slash_j__carbpol__2024__122754-169-4-6
    Average 96 stars, based on 120 article reviews
    r gnavus atcc 35913 strain - by Bioz Stars, 2026-10
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    Article Title: The human gut symbiont Ruminococcus gnavus displays strain-specific exopolysaccharides modulating the host immune response
    Article Snippet: We found that R. gnavus ATCC 35913 strain and its glucorhamnan had the highest capacity to induce a NF-κB-associated immune response in monocytes, indicating, here again, that R. gnavus ATCC 35913 was the most immunogenic strain of the three strains tested.

    Article Title: The human gut symbiont Ruminococcus gnavus displays strain-specific exopolysaccharides modulating the host immune response
    Article Snippet: The results showed that R. gnavus ATCC 35913 strain induced the highest response in THP1BlueTM NF-κB cells among the three R. gnavus strains tested (p-value<0.001) (Fig. 8).



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    r gnavus atcc 35913 strain  (ATCC)
    96
    ATCC r gnavus atcc 35913 strain
    R Gnavus Atcc 35913 Strain, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/r+gnavus+atcc+35913+strain/Ruminococcus+gnavus+Moore+et+al/10__1016_slash_j__carbpol__2024__122754-169-4-6
    Average 96 stars, based on 1 article reviews
    r gnavus atcc 35913 strain - by Bioz Stars, 2026-10
    96/100 stars
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    35913 strains r gnavus strains  (ATCC)
    96
    ATCC 35913 strains r gnavus strains
    Figure 3. Structural characteristics of sialic acid catabolic enzymes from gut bacteria. A, crystal structure of B. thetaiotaomicron VPI-5482 sialidase with catalytic domain in teal and proposed CBM40 domain in wheat (PDB 4BBW). The active site is indicated by a red sphere. Close-up of the active site shows the catalytic residues in orange and the arginine triad in green. In gray is the aligned crystal structure of S. pneumoniae NanA (PDB 2YA5) with sialic acid bound in yellow. B, composite structure of R. <t>gnavus</t> IT-sialidase RgNanH. The catalytic domain in complex with 2,7-anhydro-Neu5Ac and inserted domain, pink and light blue, respectively (PDB 4X4A), and in green the CBM40 domain in complex with 2,3-sialyllactose (PDB 6ER3). The resi- dues responsible for reaction specificity are highlighted with a yellow surface. The VPI-5482 sialidase is aligned in teal for comparison. C, 9-O- acetylesterase from P. vulgatus (PDB: 7PZG). The SGNH motif is highlighted with a pink surface and the canonical catalytic in orange in the active-site close-up. PDB, Protein Data Bank.
    35913 Strains R Gnavus Strains, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/r+gnavus+atcc+35913+strain/Ruminococcus+gnavus/pm36758803-281-5-4
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    35913 strains r gnavus strains - by Bioz Stars, 2026-10
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    r gnavus atcc 35913 strains  (ATCC)
    96
    ATCC r gnavus atcc 35913 strains
    Figure 3. Structural characteristics of sialic acid catabolic enzymes from gut bacteria. A, crystal structure of B. thetaiotaomicron VPI-5482 sialidase with catalytic domain in teal and proposed CBM40 domain in wheat (PDB 4BBW). The active site is indicated by a red sphere. Close-up of the active site shows the catalytic residues in orange and the arginine triad in green. In gray is the aligned crystal structure of S. pneumoniae NanA (PDB 2YA5) with sialic acid bound in yellow. B, composite structure of R. <t>gnavus</t> IT-sialidase RgNanH. The catalytic domain in complex with 2,7-anhydro-Neu5Ac and inserted domain, pink and light blue, respectively (PDB 4X4A), and in green the CBM40 domain in complex with 2,3-sialyllactose (PDB 6ER3). The resi- dues responsible for reaction specificity are highlighted with a yellow surface. The VPI-5482 sialidase is aligned in teal for comparison. C, 9-O- acetylesterase from P. vulgatus (PDB: 7PZG). The SGNH motif is highlighted with a pink surface and the canonical catalytic in orange in the active-site close-up. PDB, Protein Data Bank.
    R Gnavus Atcc 35913 Strains, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/r+gnavus+atcc+35913+strain/Ruminococcus+gnavus+Moore+et+al/pmc09066490-142-11-13
    Average 96 stars, based on 1 article reviews
    r gnavus atcc 35913 strains - by Bioz Stars, 2026-10
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    Figure 3. Structural characteristics of sialic acid catabolic enzymes from gut bacteria. A, crystal structure of B. thetaiotaomicron VPI-5482 sialidase with catalytic domain in teal and proposed CBM40 domain in wheat (PDB 4BBW). The active site is indicated by a red sphere. Close-up of the active site shows the catalytic residues in orange and the arginine triad in green. In gray is the aligned crystal structure of S. pneumoniae NanA (PDB 2YA5) with sialic acid bound in yellow. B, composite structure of R. gnavus IT-sialidase RgNanH. The catalytic domain in complex with 2,7-anhydro-Neu5Ac and inserted domain, pink and light blue, respectively (PDB 4X4A), and in green the CBM40 domain in complex with 2,3-sialyllactose (PDB 6ER3). The resi- dues responsible for reaction specificity are highlighted with a yellow surface. The VPI-5482 sialidase is aligned in teal for comparison. C, 9-O- acetylesterase from P. vulgatus (PDB: 7PZG). The SGNH motif is highlighted with a pink surface and the canonical catalytic in orange in the active-site close-up. PDB, Protein Data Bank.

    Journal: The Journal of biological chemistry

    Article Title: Biochemical and structural basis of sialic acid utilization by gut microbes.

    doi: 10.1016/j.jbc.2023.102989

    Figure Lengend Snippet: Figure 3. Structural characteristics of sialic acid catabolic enzymes from gut bacteria. A, crystal structure of B. thetaiotaomicron VPI-5482 sialidase with catalytic domain in teal and proposed CBM40 domain in wheat (PDB 4BBW). The active site is indicated by a red sphere. Close-up of the active site shows the catalytic residues in orange and the arginine triad in green. In gray is the aligned crystal structure of S. pneumoniae NanA (PDB 2YA5) with sialic acid bound in yellow. B, composite structure of R. gnavus IT-sialidase RgNanH. The catalytic domain in complex with 2,7-anhydro-Neu5Ac and inserted domain, pink and light blue, respectively (PDB 4X4A), and in green the CBM40 domain in complex with 2,3-sialyllactose (PDB 6ER3). The resi- dues responsible for reaction specificity are highlighted with a yellow surface. The VPI-5482 sialidase is aligned in teal for comparison. C, 9-O- acetylesterase from P. vulgatus (PDB: 7PZG). The SGNH motif is highlighted with a pink surface and the canonical catalytic in orange in the active-site close-up. PDB, Protein Data Bank.

    Article Snippet: Both ATCC 29149 and ATCC 35913 strains R. gnavus strains were able to grow on 2,7-anyhydro-Neu5Ac, the IT-sialidase transglycosylation product, as a sole carbon source (131).

    Techniques: Bacteria, Comparison

    Figure 5. Schematic representation of the sialic acid metabolic path- ways identified in gut bacteria. A, E. coli Neu5Ac metabolism. B, B. fragilis Neu5Ac metabolism. C, R. gnavus 2,7-anhydro-Neu5Ac metabolism. Differ- ence in the pathways are highlighted: orange, 2,7-anhydro-Neu5Ac meta- bolic pathway; green, “E. coli” Neu5Ac metabolic pathway; blue, B. fragilis Neu5Ac metabolic pathway.

    Journal: The Journal of biological chemistry

    Article Title: Biochemical and structural basis of sialic acid utilization by gut microbes.

    doi: 10.1016/j.jbc.2023.102989

    Figure Lengend Snippet: Figure 5. Schematic representation of the sialic acid metabolic path- ways identified in gut bacteria. A, E. coli Neu5Ac metabolism. B, B. fragilis Neu5Ac metabolism. C, R. gnavus 2,7-anhydro-Neu5Ac metabolism. Differ- ence in the pathways are highlighted: orange, 2,7-anhydro-Neu5Ac meta- bolic pathway; green, “E. coli” Neu5Ac metabolic pathway; blue, B. fragilis Neu5Ac metabolic pathway.

    Article Snippet: Both ATCC 29149 and ATCC 35913 strains R. gnavus strains were able to grow on 2,7-anyhydro-Neu5Ac, the IT-sialidase transglycosylation product, as a sole carbon source (131).

    Techniques: Bacteria

    Figure 6. Structural characteristics of 2,7-anhydro-Neu-5Ac metabolic enzymes. Once transported inside R. gnavus ATCC 29149 cells (A) RgNanOx converts 2,7-anhydro-Neu5Ac into Neu5Ac with the aid of an NAD cofactor. The NAD cofactor and a bound citrate molecule are shown in yellow and green, respectively (PDB 6Z3C). B, Neu5Ac is subsequently converted to ManNAc and pyruvate by RgNanA. Neu5Ac in its open-chain ketone form is shown bound in the active site with catalytic residues in green (PDB 6RD1). For clarity, the surface representation has been omitted from the active site due to its buried nature. PDB, Protein Data Bank.

    Journal: The Journal of biological chemistry

    Article Title: Biochemical and structural basis of sialic acid utilization by gut microbes.

    doi: 10.1016/j.jbc.2023.102989

    Figure Lengend Snippet: Figure 6. Structural characteristics of 2,7-anhydro-Neu-5Ac metabolic enzymes. Once transported inside R. gnavus ATCC 29149 cells (A) RgNanOx converts 2,7-anhydro-Neu5Ac into Neu5Ac with the aid of an NAD cofactor. The NAD cofactor and a bound citrate molecule are shown in yellow and green, respectively (PDB 6Z3C). B, Neu5Ac is subsequently converted to ManNAc and pyruvate by RgNanA. Neu5Ac in its open-chain ketone form is shown bound in the active site with catalytic residues in green (PDB 6RD1). For clarity, the surface representation has been omitted from the active site due to its buried nature. PDB, Protein Data Bank.

    Article Snippet: Both ATCC 29149 and ATCC 35913 strains R. gnavus strains were able to grow on 2,7-anyhydro-Neu5Ac, the IT-sialidase transglycosylation product, as a sole carbon source (131).

    Techniques: